Nonlinear Feature Transformation and Deep Fusion for Alzheimer's Disease Staging Analysis

In this study, we develop a novel nonlinear metric learning method to improve biomarker identification for Alzheimer’s Disease (AD) and Mild Cognitive Impairment (MCI). Formulated under a constrained optimization framework, the proposed method learns a smooth nonlinear feature space transformation that makes the mapped data more linearly separable for SVMs. The thin-plate spline (TPS) is chosen as the geometric model due to its remarkable versatility and representation power in generating sophisticated yet smooth deformations. In addition, a deep network based feature fusion strategy through stacked denoising sparse auto-encoder (DSAE) is adopted to integrate cross-sectional and longitudinal features estimated from MR brain images. Using the ADNI dataset, we evaluate the effectiveness of the proposed feature transformation and feature fusion strategies and demonstrate the improvements over the state-of-the-art solutions within the same category. ∗Corresponding author. Email: [email protected] ∗∗Data used in preparation of this article were obtained from the Alzheimers Disease Neuroimaging Initiative (ADNI) database (adni.loni.usc.edu). As such, the investigators within the ADNI contributed to the design and implementation of ADNI and/or provided data but did not participate in analysis or writing of this report. A complete listing of ADNI investigators can be found at: http://adni.loni.usc.edu/wp-content/uploads/how_to_apply/ADNI_ Acknowledgement_List.pdf Preprint submitted to Pattern Recognition September 26, 2016